Phone "chargers" with USB sockets or cables are simply 5V power units.
The actual charge controller is in the phone (or other device) alongside the battery.
A lithium cell needs an accurately regulated voltage, usually 4.2V, plus a current limit circuit to prevent it drawing too much current when flat.
Without voltage regulation, they can be destroyed by over-charge - often bursting or even catching fire.
Also, if they are over-discharged (much below around 3V per cell) and left for any time like that, the internal structure can break down in another way and cause them to short out.
Again, one that happens, the cell is useless.
Your cells may well already be wrecked if they are only showing 2V on charge...
More information:
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