Its a long time since we used MPSim, but with the Arduino IDE find all thats needed, is to run the code on the Uno or similar and use the inbuilt Serial Monitor along with code instructions to give feedback.
If you want to start using Breakpoints and serious debugging then use something like Atmel Studio IDE with Visual Micro plug in, plenty of good Ytubes on such debugging.
Have to say, for general hobby proects, have yet to find the need to use that kind of debugging with C++ and Arduino, though depends on your projects.