12 V brakes take around 2.5 A per wheel, so they are around 5 Ohms. 6 V ones would probably be about 1 - 2 Ohms.
You could wire 6 V brake magnets in series. There are plenty of other places where a single broken wire would stop the trailer brakes working, so I don't think that putting two brakes in series increases the risk significantly. With a modern brake controller you will get an immediate indication that the brakes are open circuit, even if you are not using them at the time.
A modern brake controller is adjustable, so you could just wire up the 6 V magnets in parallel. It will probably work fine, and the adjustment will be in the bottom half of the range. If you find that the brake adjustment is too sensitive, you could just change to 12 V magnets or put a 2 Ohm resistor in series with each brake. You will need to use a resistors rated to 100 W or more.
You could buy a rectifier for the 12 V transformer. Something like this would be fine:-
https://www.ebay.com/itm/224241646030
You will get more than 12 V out, but to test the brakes it would do. It will take ages to overheat the brake magnets.
I found out recently that proportional brake controllers existed in the 1950s. They had a connection to the brake hydraulics so that the voltage to the brakes tracked the brake pressure.