you need to supply your filament continuously. if you don't, you will not have the proper electron emission for the magnetron to oscillate, and you will shorten the life of the tube. it looks like the opto for controlling the inverter is IC701. you might want to find out what IC702 is used for, it provides feedback to the controller, but it's purpose is not clear. it could be a protection circuit, with the inverter operation monitored by pins 10, 11, and 12, and pins 7, and 8 provide overcurrent monitoring. if you try controlling the inverter by modifying the drive line for Q702, you might trip one of the protection circuits. it's better to use IC701. keep in mind that the whole primary side of this inverter is floating at about 60Vac, which means that everything connected to it externally must be done through opto isolators, and you can't clip a scope ground to the - side of the bridge rectifier. if you need to look at stuff on the primary side, the safest way is to use a dual channel scope, with ground connected to the chassis ground, channel 2 probe connected to the -rail of the bridge rectifier, and the scope in ADD mode, with channel 2 inverted. you connect both probes to the hot ground, and adjust gain on channel 2 to null out the sine wave. both channels should be set at 20v/cm or 10v/cm. you leave channel 2 probe on the hot ground and use ch1 for measurements. you don't need an isolation transformer if you use this differential mode scope setup, so you will never have the scope ground connected to a hot ground. using an isolation transformer solves one problem and creates another, it causes the chassis ground of the unit under test to float at 60V once a scope ground is connected to the hot side of the supply.