Your post makes little or no sense - I'm 'presuming' that you have a switch-mode converter converting the 12.6V down to 4.2V?, and you want to monitor the voltage across the three cells? (which would be the obvious requirement).
There's no problem doing this, all you need is a simple resistive attenuator - BUT you need individual access to the input that measures it's battery voltage, presumably that is simply connected to the 4.2V battery input, you would need to separate it.
Far easier solution, put the cells in parallel instead of series, everything then works just as it was originally made to.