You are not supposed to look at the junction of R5, R6 and C3 because it is in the middle of the lowpass filter circuit. It looks like a single order filter. Removing C3 makes a single order lowpass filter with a 45Hz -3dB cutoff.
My filter is a normal Sallen Key second order Butterworth lowpass filter with a cutoff frequency of 103Hz. The gain of 1.589 times by R7 and R8 is extremely important to make a Butterworth response. When the gain is a little more than 1.6 then there is a peak at 103Hz and if the gain is 3 or more then the filter oscillates at 103Hz. What are your R7 and R8 values?