Yeah, that is what I am probably going to do. I want to sell the entire PSU with the circuit installed, but for those that already have the PSU I will offer them just the temperature control circuit on a PCB and put up short instructions on how to fit it on youtube most likely or just printed on paper.
So, I probably could control both fans off one circuit, question is do I want to? I think it would be fairly safe to do so. If I control both fans off one circuit I will only be getting temperature readings off the one supply, but I do not believe there is a very tight range that the fan speed has to operate, in other words, as long as the fan speed is fairly close to the speed it needs to be based on temperature I think it will be fine. I don't think it will matter if the two PSUs are slightly different temperatures. The only thing that does concern me a bit is that it's possible to put leads on the ground of the upper PSU's ground and Vcc and the lower at the same time such that you could get two 12 volt supplies or one 24 volt supply out of the same set up and somebody that has it set up this way could potentially only use the 12 volts from the upper and not the lower. Then if I have the thermister on the lower it will not speed up the fan when the upper heats up...so maybe it I should just have one for each unit. Possibly in the ones I sell I could have one for both and just not put a lead on the ground of the upper, if they want 12v they would have to connect to the lower. Any thoughts/opinions?